Extracted from the posting
TL;DR
Associate computational scientist at E11 Bio, a non-profit connectomics research org in Alameda, CA, building pipelines for petabyte-scale brain imaging data. Work covers maintaining data pipelines, on-prem servers, storage and networking, and building lab tools and automation with wet lab scientists. Stack includes Python, git, Linux, numpy/scipy, and AI-assisted agentic development.
The full posting
E11 Bio is on a mission to advance connectomics towards whole brain scale for humans and other mammals. We are a collaborative and interdisciplinary team of scientists and engineers engaged in a neuroscience moonshot project to develop a radical technology platform for scalable mammalian brain mapping. E11 Bio is a non-profit Convergent Research focused research organization located in Alameda, California, pursuing blue-skies neuroscience research yet operating like a nimble, tight-knit start-up. Read our technology roadmap.
E11 Bio is seeking a motivated, mission-aligned Associate computational scientist to develop, maintain and optimize the workflows and infrastructure that process our large-scale brain mapping data. You will be responsible for keeping petabytes of imaging data moving reliably from the microscope to finished, processed volumes. That means helping maintain our data pipelines as well as being hands-on with the physical computing and network infrastructure. In addition, you will interact daily with biologists and microscopists on frontier research to identify new areas where scientific computing may accelerate their progress. For this you will build solutions that solve real problems at the bench: from quality control and real-time data analysis to agentic lab automation.
This position is on-site only, in Alameda, CA.
Responsibilities
Required qualifications
Preferred Qualifications
Who will love this job
Outcomes
We offer
E11 Bio, LLC is an Equal Employment Opportunity employer that proudly pursues and hires a diverse workforce. We do not make hiring or employment decisions on the basis of race, color, religion or religious belief, ethnic or national origin, nationality, sex, gender, gender-identity, sexual orientation, disability, age, military or veteran status, or any other basis protected by applicable local, state, or federal laws or prohibited by Company policy. We strive for a healthy and safe workplace and strictly prohibit harassment of any kind.
Compensation: USD 100,000 – 165,000 per year salary
